98 Drivers, dynamics and epidemiology of antimicrobial resistance in animal production (Research report; Wall et al., 2016)

98 Research report – Wall – 2016 – Drivers, dynamics and epidemiology of antimicrobial resistance in animal production

98 Research report
Drivers, dynamics and epidemiology of antimicrobial resistance in animal production by Wall, B.A., Mateus, A.L.P., Marshall, L., Pfeiffer, D.U., Lubroth, J., Ormel, H.J., Otto, P. and A. Patriarchi
2016 Food and Agriculture Organization of the United Nations : 68p.
in Significant Impact Group(s): Other
Species targeted: Pigs;Poultry;Dairy;Beef;Sheep;
Age: Not stated;
Summary: The use of antimicrobial drugs leads to a relative increase in resistant bacteria, even though antimicrobial resistance is an old and naturally occurring phenomenon in bacteria. In intensive livestock production systems, resistant bacteria can spread easily between animals and this can be made worse if biosecurity is inadequate. Food is likely to be quantitatively the most important source of transmission from livestock to humans, although there is no direct link between rise of antimicrobial resistance in humans in relation to food consumption. In order to build successful solutions to the problem of antimicrobial resistance, is essential to understand what drives the spread of AMR in animal production.
The effect of extensive and organic farming systems and antimicrobial use on the rise and spread of AMR are discussed. However it is still not clear how sustainable agriculture systems can help fight AMR.
It is now accepted that increased antimicrobial resistance (AMR) in bacteria affecting humans and animals in recent decades is primarily influenced by an increase in usage of antimicrobials for a variety of purposes, including therapeutic and non-therapeutic uses in animal production. Antimicrobial resistance is an ancient and naturally occurring phenomenon in bacteria. But the use of antimicrobial drugs – in health care, agriculture or industrial settings – exerts a selection pressure which can favour the survival of resistant strains (or genes) over susceptible ones, leading to a relative increase in resistant bacteria within microbial communities.
In intensive livestock production systems, resistant bacteria can spread easily between animals and this can be exacerbated if biosecurity is inadequate.
In aquaculture, AMR can develop in aquatic and fish gut bacteria as a result of antimicrobial therapy or contamination of the aquatic environment with human or animal waste. The extent and persistence of antimicrobial residues in aquatic systems is unknown and current evidence is conflicting.
Food is likely to be quantitatively the most important potential transmission pathway from livestock to humans, although direct evidence linking AMR emergence in humans to food consumption is lacking.
An improved understanding of the epidemiology of AMR emergence and spread in animal production will provide an essential foundation for successful mitigation strategies.
The relationships between different types of farming systems and both AMU and the emergence and spread of AMR are discussed in this paper, including extensive and organic systems, but there is still a notable lack of knowledge on the role that sustainable agriculture systems can play in combatting AMR.
Most importantly, future research needs to involve an interdisciplinary (e.g. One Health) approach, integrating agricultural, medical, environmental and social sciences, and especially recognizing the importance of human behaviour. A set of specific recommendations to fill current knowledge gaps is presented in the final section of this technical paper.
98 Research report – Wall – 2016 – Drivers, dynamics and epidemiology of antimicrobial resistance in animal production
Where to find the original material:
https://agris.fao.org/agris-search/search.do?recordID=XF2017002096;
Country: UK, IT

97 Selective Dry Cow by Eurodairy (Farm Innovation)

 

 

97 Farm Innovation – Selective Dry Cow by Eurodairy

97 Farm Innovation
Selective Dry Cow by Eurodairy
in Significant Impact Group(s): Pathogen management \ Managing sick animals
Species targeted: Dairy;
Age: Adult;
Summary: This sheet describes how the Dutch dairy sector reduced the use of antibiotics in dairy farming. Between 2009 and 2016, usage decreased by 48%.
Selective drying off has made an important contribution to this reduction. Preventive use of antibiotics for drying off dairy cattle is no longer allowed. The protocol uses the somatic cell count per animal up to 6 weeks prior to drying off. If the cell count number is below 50,000 (cows) or 150,000 (heifers) per ml, no antibiotics may be used. If the cell number is higher, only a first choice antibiotic may be used in accordance with the farm health plan. The use of 2nd and 3rd choice antibiotics follows strict regulations, and is only allowed after additional testing.
The sheet also contains a farmers experience with omitting the dry off period.
97 Farm Innovation – Selective Dry Cow by Eurodairy
Where to find the original material: (in English)
https://eurodairy.eu/resources/the-dutch-way-of-reducing-antibiotic-use/;
Country: NL

96 Oregano oil by Nottingham Trent University (Farm Innovation)

 

 

96 Farm Innovation – Oregano oil by Nottingham Trent University96 Farm Innovation – Oregano oil by Nottingham Trent University

96 Farm Innovation
Oregano oil by Nottingham Trent University
in Significant Impact Group(s): Feed / gut health \ Feed additives and supplements – Feed additives and supplements ; Pathogen management
Species targeted: Pigs;
Age: Young; Adult;
Summary: British researchers have shown in a recently published study the beneficial effect of the addition of natural oregano essential oil in the diet of breeding sows and the beneficial results on piglets before and after weaning. “Oregano essential oil is well documented to provide support for animal health and performance due to its active compounds. Carvacrol and thymol are two such compounds and have been shown to have both antimicrobial and antioxidant functions.” support the authors of the study.
The research was carried out in a commercial pig unit in the UK and involved 62 multiparous sows. The conclusion was that the inclusion of oregano essential oil helped maintain the body condition score of suckling sows, increased weight gain during the first week of life of piglets, decreased pre-weaning mortality and significantly decreased the incidence of drug use.
96 Farm Innovation – Oregano oil by Nottingham Trent University
Where to find the original material: (in English)
https://www.revista-ferma.ro/articole/zootehnie/impactul-eubioticelor-pe-baza-de-oregano-asupra-sanatatii-si-performantei-scroafelor;
Country: UK

95 DANMAP by DANMAP (Farm Innovation)

 

 

95 Farm Innovation – DANMAP by DANMAP

95 Farm Innovation
DANMAP by DANMAP
in Significant Impact Group(s): AMU reduction strategies
Species targeted: Pigs; Poultry; Dairy; Beef; Sheep;
Age: Young; Adult;
Summary: This comprehensive report (152 pages) is issued by DANMAP, the Danish Integrated Antimicrobial Resistance Monitoring and Research Programme. It presents the results of monitoring the antimicrobial use and antimicrobial resistance in food animals, food and humans in 2017. The report summarizes the result of susceptibility testing of isolates obtained by hospitals, general practice, veterinary practice and the National Food and Veterinary Authority, as well as records of types and amount of antimicrobials prescribed by amongst others veterinarians. Chapters are ‘Total antimicrobial consumption in animals’ and ‘Antimicrobial consumption by animal species’.
95 Farm Innovation – DANMAP by DANMAP
Where to find the original material: (in English)
https://www.danmap.org/-/media/arkiv/projekt-sites/danmap/danmap-reports/danmap-2017/danmap2017.pdf?la=en;
Country: DK

94 Projecting Social Science into Defra’s Animal Welfare Evidence Base – A Review of current research and evidence base on the issue of farmer behaviour (Research report; Escobar and Buller, 2013)

 

 

94 Research report – Escobar – 2013 – Projecting Social Science into Defra’s Animal Welfare Evidence Base A Review of current research and evidence base on the issue of farmer behaviour

4 Research report
Projecting Social Science into Defra’s Animal Welfare Evidence Base A Review of current research and evidence base on the issue of farmer behaviour by Escobar, M.P. and H. Buller
2013 Final Report to the Department for Environment Food and Rural Affairs : 94p.
in Significant Impact Group(s): Housing and welfare
Species targeted: Dairy; Sheep;
Summary: This report reviews Defra’s social science evidence base on the issue of farmer behaviour,
particularly with regards to animal welfare. The report recommends that the Department would benefit
from understanding and interacting with social science beyond the fields of psychology and behavioural
economics.
Rather than attempting to address the “perfect farmer” by aiming to influence their psychology,
interventions could seek to impact the social interactions and the cultural context within which farmers
take actions and decisions. Four specific farmer practices around animal welfare are reviewed in the
report, presenting suggestions that could help coordinate social science research with farmers’ actions
and decisions around animal welfare. Three main areas for further research are highlighted in this report:
the importance of farmer – vet relationships, the dynamics of auditing and inspection, the role of cultural
ideas about farming and “good” farming practices in farmers’ actions and decisions.
Three main areas for further research emerge from the selected case studies:
1. farmer – vet relationships
2. the dynamics of audit and inspection regimes
3. the complex role of cultural ideas about farming and “good” farming practices in farmers’ actions
and decisions.
Besides these three main areas we also point to five other specific themes to integrate a social science
research agenda:
– a better understanding of society’s interpretations of animal welfare as a social issue;
– an evaluation of the literature and lessons emerging from participatory, collective and dialogue-based experiences of behaviour change;
– a better understanding of the influence of issues of affect, care and empathy within human-animal relations on farmers’ actions and decisions;
– the effect of information demands and information flows on farmers’ practices of record-keeping
and record-usage;
– the lessons to be learnt from other areas where voluntary and non-regulatory approaches have
been implemented in order to generate changes in actions and decisions, such as agri-environment
schemes and climate change adaptation and mitigation strategies.
94 Research report – Escobar – 2013 – Projecting Social Science into Defra’s Animal Welfare Evidence Base A Review of current
research and evidence base on the issue of farmer behaviour
Where to find the original material:
https://research-information.bris.ac.uk/en/publications/projecting-social-science-into-defras-animalwelfare-evidence-base(29b27372-4f93-4c7d-b193-454287d09100).html;
Country: UK

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100 Antimicrobials in agriculture and the environment: reducing unnecessary use and waste (Research report; Neil, 2015)

 

 

Significant Impact Group(s): AMU reduction strategies \ Legislation and incentives; Government
Species targeted: Pigs; Poultry; Dairy; Beef; Sheep;
Summary: This report presents focus areas to globally reduce the use of antibiotics in agriculture and the environment:
1. Agree on targets to reduce antibiotic use in food production, to an acceptable level per kilogram of livestock and fish, together with limitations of use of antibiotics that are important for humans.
2. Agree on minimum limits for antibiotic environmental waste, which should be taken into consideration by pharmaceutical companies, healthcare buyers and regulatory agencies everywhere.
3. Improved surveillance at an international level to monitor antimicrobial use and waste, and evaluate progress towards global targets.
Interventions in agriculture that could change antibiotic use include improvements in infection control, better animal husbandry practices, greater use of vaccines and the adoption of diagnostic devices to improve veterinary prescribing practices.
This report also discusses the roles of taxation, subsidies, and regulation in reducing the risks associated with agricultural use of antibiotics and environmental contamination.
This paper proposes three broad interventions to take bold global action to substantially reduce the use of antibiotics in agriculture and the quantities being dispersed into the environment:
1. A global target to reduce antibiotic use in food production to an agreed level per kilogram of livestock and fish, along with restrictions on the use of antibiotics important for humans.
a. We need to reduce global levels of antibiotic use in agriculture, to an agreed limit for each country, but it should be for individual countries to decide how best to achieve this goal – a global target would make this possible. We believe an ambitious but achievable target for reducing antibiotic use in agriculture is needed, to reduce use over the next 10 years. There are countries that have advanced farming systems with very low levels of antibiotic use, particularly in Scandinavia. Denmark has combined low use with being one of the largest exporters of pork in the world. Reducing levels of use to that of Denmark for example, an average of less than 50 milligram (mg) of antibiotics used a year per kilogram (kg) of livestock in the country, may be a good starting point for such a target. We think this would be feasible without harming the health of animals or the long-term productivity of farmers. This is based on our understanding of academic literature and case studies. The exact level of a target would, however, need to be discussed and tested by experts. Low and middle-income countries may need more time to achieve such a target, while many of these countries may already be below the threshold.
b. As well as reducing the quantity of use, the types of antibiotics used are also important. Currently many antibiotics that are important for humans are used in animals. We believe that countries need to come together and agree to restrict, or even ban, the use of antibiotics in animals that are important for humans.
2. The rapid development of minimum standards to reduce antimicrobial manufacturing waste released into the environment. This needs to be viewed as a straightforward issue of industrial pollution, and it is the responsibility of all actors in the supply chain to ensure that industrial waste is treated properly as a matter of good manufacturing practice. The risk of drug resistance must urgently become a key environmental consideration for all pharmaceutical companies, healthcare buyers and regulatory agencies everywhere. Failing to do this does most harm to the health of populations living near the manufacturing sites who are exposed to polluted water, and are in a way are paying the price of cheap antibiotics for the rest of the world. But in the long-term, we know that resistance spreads and these strains will in time likely become a global problem.
3. Improved surveillance to monitor these problems, and progress against global targets. There remain too many knowledge gaps regarding patterns of antimicrobial use in agriculture and release during manufacturing, and what this means for resistance and, ultimately, human health. This needs to change if meaningful progress is to be made.
As with the human health aspects of AMR, these are complex issues that require concerted, coordinated action at an international level. Drug-resistant infections know no borders and do not respect barriers between industry, regulators and buyers, or between animals, humans and their wider environment. There are encouraging signs of some governments adopting a broad ‘one health’ approach to tackling the issue of resistance, but it is an approach that needs to be replicated by others. We believe that success can only be achieved by considering a full range of interventions:
• In agriculture, these should take into account the key drivers of the real or perceived need for antibiotics, whether for use as therapy, prophylaxis (prevention), or growth promotion. Interventions will no doubt include improvements in infection control, better animal husbandry practices
100 Research report – Neill – 2015 – Antimicrobials in agriculture and the environment_ reducing unnecessary use and waste
Where to find the original material:
https://amr-review.org/Publications.html;
Country: UK

100 Research report – Neill – 2015 – Antimicrobials in agriculture and the environment_ reducing unnecessary use and waste

93 Guidance notes 2013 by IDF (Farm Innovation)

 

 

Significant Impact Group(s): AMU reduction strategies
Species targeted: Dairy;
Age: Adult;
Summary: This guide describes prudent use of antimicrobial agents in dairy production. It contains a chapter with definitions of used terminology, complemented with descriptions of ‘Good practices’ for dairy farmers, veterinarians, food processing companies, pharmaceutical companies and competent authorities. It also includes fact sheets for above mentioned sectors.
The focus of this comprehensive publication is on desired outcomes rather than on specific prescriptive actions or processes. It provides examples of recommended practices for all participants.
A factsheet for example includes principles like:
– Have an effective herd health management program in place, by using an identification system that allows all animals to be identified individually from birth to death + Keep written records of all treatment and identify treated animals appropriately
– Use all antimicrobial agents as directed, by only using veterinary medicines as prescribed by veterinarians
93 Farm Innovation – Guidance notes 2013 by IDF
Where to find the original material: (in English)
https://store.fil-idf.org/product/guide-to-prudent-use-of-antimicrobial-agents-in-dairy-production-in-english-3/;
Country: UK

93 Farm Innovation – Guidance notes 2013 by IDF

92 Guidance notes by IDF 2017 (Farm Innovation)

 

 

Significant Impact Group(s): AMU reduction strategies
Species targeted: Dairy;
Age: Adult;
Summary: This factsheet describes what antimicrobial resistance (AMR) is, outlines dairy sector guidance on prudent use of antimicrobials and defines the global dairy position on AMR. Topics that are discussed vary from guidelines for prudent use for dairy farmers, veterinary services, food processing and pharmaceutical company’s and regulators. Guideluines for dairy farmers are, for example:
– Set up biosecurity measures to prevent introduction of diseases and resistant bacteria onto the farm
– Implement a management programma for chronically infected cows
– Implement an effective herd health management programme
– Avoid feeding milk-containing residues to calves or other animals on the farm
– Ensure that withdrawel times set for the antimicrobials are respected before the milk from treated animals is used, supported by strategic residue testing of milk
92 Farm Innovation – Guidance notes by IDF
Where to find the original material: (in English)
https://www.fil-idf.org/wp-content/uploads/2017/05/Factsheet-003_2017-Guidance-on-Antimicrobial-Resistance-from-the-Dairy-Sector.pdf;
Country: UK

92 Farm Innovation – Guidance notes by IDF

91 Cola and vaccination by Dutch vet (Industry Innovation)

 

 

Significant Impact Group(s): Pathogen management \ Managing sick animals ; Feed / gut health
Species targeted: Pigs;
Age: Young;
Outcome Parameter(s): piglet diarrhoea;
Summary: In piglets, birth diarrhoea is caused by bacteria and viruses. These are E. coli bacteria, clostridium bacteria C. perfringens type A and type C and rotaviruses. According to the vet Schuttert, the effect of vaccination is usually not spectacular, because the effect also runs via the colostrum. An average sow produces enough colostrum for 12 piglets. But the average litter size is now 15 piglets. One way to improve colostrum supply is split suckling. Vet Schuttert concludes that in case of birth diarrhoea in piglets it is almost always necessary to take steps on several fronts. There is often much to gain with extra attention to hygiene. If the piglets do develop diarrhoea, it may make sense to provide the sows with acid. He usually start by advising lime and cola . Then offering water and food. And the third step is the possible application of vaccinations and / or antibiotics.
91 Industry Innovation – cola and vaccination by Dutch vet
Where to find the original material: (in Dutch)
https://www.nieuweoogst.nl/nieuws/2019/06/06/cola-light-niet-geschikt-voor-kraamstal;
Country: NL

91 Industry Innovation – cola and vaccination by Dutch vet

90 Calf reception by LTO calf group (Industry Innovation)

 

 

Significant Impact Group(s): Housing and welfare \ Weaning age and management ; Pathogen management
Species targeted: Dairy;
Age: Young;
Outcome Parameter(s): lower antibiotic use; lower mortality; improved animal welfare; improved animal health; better technical results
Summary: With the ‘Calf Reception’ project, the veal calf sector (initiator is the Branch Organization for the Calf Sector (SBK)) wants to improve the reception of newborn calves on the veal calf farm. The project focuses on the management of the veal farmer during the first four weeks, including the release of the calves in groups. During this period, improvements in management can lead to lower antibiotic use and loss, better animal welfare and health, more job satisfaction and better technical results. The main target group of the project are the 1,300 veal veal farmers in the Netherlands. Group meetings and workshops are organized, but individual conversations with veal farmers and advisers are also possible. Aspects that will be discussed include a clean barn, clean feeding troughs and teats, temperature in the barn on arrival, CO2 and humidity, feeding milk.
90 Industry Innovation – Ontvangst Kalveren by LTO calf group
Where to find the original material: (in Dutch)
https://www.nieuweoogst.nl/nieuws/2019/03/28/vleeskalversector-start-nieuw-project;
Country: NL

90 Industry Innovation – Ontvangst Kalveren by LTO calf group